Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | PLIM_RS15710 | Q8KIY1 | - | 3957366 - 3959957 | 94694.6 |
| class i sam-dependent methyltransferase | PLIM_RS15715 | Not Available | - | 3959960 - 3961378 | 53271.8 |
| yafy family protein | PLIM_RS25060 | Not Available | - | 3961539 - 3962246 | 26809.7 |
| atp-grasp fold amidoligase family protein | PLIM_RS15730 | Not Available | + | 3963016 - 3964707 | 64511.0 |
| hypothetical protein | PLIM_RS15735 | Not Available | + | 3964776 - 3965522 | 27259.2 |
| hypothetical protein | PLIM_RS24210 | Not Available | + | 3965597 - 3965890 | 10721.6 |
| dmt family protein | PLIM_RS25065 | Not Available | + | 3968572 - 3971304 | 100742.0 |
| hypothetical protein | PLIM_RS15750 | Not Available | + | 3972003 - 3972518 | 18856.5 |
| hypothetical protein | PLIM_RS24215 | Not Available | + | 3973859 - 3974533 | 23882.9 |
| transposase | PLIM_RS15765 | Not Available | - | 3974651 - 3975043 | 14743.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.