Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv pili methyl-accepting chemotaxis transducer n-terminal domain-containing protein | PLIM_RS15660 | P23222 | - | 3943057 - 3945018 | 72617.6 |
| mfs transporter | PLIM_RS15665 | Q9LPV5 | + | 3945585 - 3946961 | 49116.0 |
| dmsc/ynfh family molybdoenzyme membrane anchor subunit | PLIM_RS15670 | P45003 | + | 3947301 - 3948989 | 61186.9 |
| molybdopterin oxidoreductase family protein | PLIM_RS15675 | P39458 | + | 3948986 - 3951211 | 82902.0 |
| nira family protein | PLIM_RS15680 | I3R637 | + | 3951427 - 3953274 | 67508.4 |
| sulfite reductase subunit alpha | PLIM_RS15685 | O32214 | + | 3953322 - 3954986 | 61704.4 |
| transposase | PLIM_RS24775 | Not Available | - | 3955000 - 3955242 | 9596.98 |
| hypothetical protein | PLIM_RS15695 | Not Available | + | 3955245 - 3955493 | 9283.03 |
| hypothetical protein | PLIM_RS15700 | Not Available | + | 3955683 - 3955952 | 10230.4 |
| response regulator | PLIM_RS23080 | Not Available | - | 3956144 - 3957376 | 45445.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.