Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pqq-binding-like beta-propeller repeat protein | PLIM_RS01270 | Not Available | - | 319067 - 320359 | 47267.5 |
| hypothetical protein | PLIM_RS23950 | Not Available | - | 320819 - 321019 | 7612.05 |
| pentapeptide repeat-containing protein | PLIM_RS01280 | Not Available | - | 321126 - 321509 | 14178.5 |
| hypothetical protein | PLIM_RS01285 | Not Available | - | 321506 - 321892 | 14811.9 |
| secondary thiamine-phosphate synthase enzyme yjbq | PLIM_RS01290 | Not Available | - | 321906 - 322328 | 15918.0 |
| hypothetical protein | PLIM_RS01295 | Not Available | + | 322903 - 325218 | 82945.0 |
| abc transporter atp-binding protein | PLIM_RS01300 | P42332 | + | 325343 - 326269 | 34942.7 |
| hydantoinase/oxoprolinase family protein | PLIM_RS01305 | Q58250 | + | 326315 - 327367 | 37556.2 |
| pqq-binding-like beta-propeller repeat protein | PLIM_RS01310 | Not Available | - | 327445 - 328707 | 44891.5 |
| hypothetical protein | PLIM_RS01315 | Not Available | - | 328842 - 330053 | 44250.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.