Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase | PLIM_RS15555 | Not Available | - | 3924175 - 3925497 | 49367.3 |
| hypothetical protein | PLIM_RS15560 | Not Available | + | 3925648 - 3925977 | 12570.6 |
| prolyl oligopeptidase family serine peptidase | PLIM_RS15565 | E4UYL6 | + | 3926218 - 3928569 | 88064.2 |
| amidohydrolase family protein | PLIM_RS15570 | P72349 | - | 3928923 - 3930530 | 57228.1 |
| fad-binding oxidoreductase | PLIM_RS15575 | Q0BUV2 | - | 3930551 - 3931864 | 49396.9 |
| carboxypeptidase-like regulatory domain-containing protein | PLIM_RS15580 | Not Available | - | 3931949 - 3932380 | 15950.1 |
| duf1559 domain-containing protein | PLIM_RS15585 | Not Available | - | 3932456 - 3933436 | 35944.2 |
| xylr family transcriptional regulator | PLIM_RS15590 | Not Available | - | 3933677 - 3934819 | 42943.7 |
| hypothetical protein | PLIM_RS15595 | Not Available | + | 3935013 - 3935408 | 14150.6 |
| hypothetical protein | PLIM_RS15600 | Not Available | + | 3935564 - 3935746 | 6825.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.