Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldose epimerase family protein | PLIM_RS15460 | P05149 | + | 3892023 - 3893201 | 41657.9 |
| hypothetical protein | PLIM_RS15465 | Not Available | - | 3893805 - 3895322 | 55998.1 |
| dna polymerase i | PLIM_RS15470 | P00582 | + | 3896003 - 3899032 | 111942.0 |
| hypothetical protein | PLIM_RS15475 | Not Available | + | 3899262 - 3901169 | 69772.4 |
| abc transporter atp-binding protein | PLIM_RS15480 | Q8XXY9 | + | 3901259 - 3902350 | 40026.8 |
| hypothetical protein | PLIM_RS15485 | Not Available | + | 3902418 - 3904103 | 61237.0 |
| dna repair exonuclease | PLIM_RS15490 | O07522 | + | 3904317 - 3905666 | 49254.5 |
| yhan family protein | PLIM_RS15495 | O08455 | + | 3905663 - 3909220 | 135481.0 |
| hypothetical protein | PLIM_RS24440 | Not Available | + | 3909386 - 3909553 | 6239.69 |
| tir domain-containing protein | PLIM_RS15500 | Not Available | + | 3909632 - 3910603 | 35889.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.