Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbon storage regulator | PLIM_RS15410 | A5IKH0 | + | 3880424 - 3880624 | 7216.78 |
| hypothetical protein | PLIM_RS15415 | Not Available | + | 3880924 - 3881610 | 25115.4 |
| ligase-associated dna damage response dexh box helicase | PLIM_RS15420 | Not Available | - | 3881612 - 3884221 | 97133.8 |
| vwa domain-containing protein | PLIM_RS23070 | Not Available | + | 3884609 - 3885706 | 38397.6 |
| hypothetical protein | PLIM_RS15430 | Not Available | + | 3885675 - 3886784 | 40843.8 |
| hypothetical protein | PLIM_RS15435 | Not Available | - | 3886860 - 3887204 | 12082.3 |
| lactate racemase domain-containing protein | PLIM_RS15440 | Not Available | + | 3887668 - 3888984 | 47606.5 |
| hd domain-containing protein | PLIM_RS15445 | P54168 | + | 3889036 - 3889713 | 25529.0 |
| hypothetical protein | PLIM_RS15450 | Not Available | - | 3889844 - 3890608 | 27645.9 |
| rna polymerase sigma factor | PLIM_RS15455 | Not Available | - | 3890679 - 3891353 | 25638.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.