Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system vapc family toxin | PLIM_RS15355 | Not Available | + | 3868328 - 3868741 | 15290.5 |
| hypothetical protein | PLIM_RS15360 | Not Available | - | 3868762 - 3869796 | 37155.2 |
| prka family serine protein kinase | PLIM_RS15365 | P39134 | + | 3870862 - 3872907 | 78444.8 |
| duf444 family protein | PLIM_RS15370 | B9DZE4 | + | 3873018 - 3874124 | 41599.4 |
| hypothetical protein | PLIM_RS15375 | Not Available | + | 3874246 - 3874758 | 18579.1 |
| spovr family protein | PLIM_RS15380 | P37875 | + | 3874795 - 3876336 | 60379.2 |
| hypothetical protein | PLIM_RS15385 | Not Available | + | 3876549 - 3877205 | 24572.4 |
| hypothetical protein | PLIM_RS15390 | Not Available | + | 3877202 - 3877789 | 21264.3 |
| mbl fold metallo-hydrolase | PLIM_RS15395 | Q8LGU7 | - | 3878022 - 3878861 | 32326.3 |
| gfo/idh/moca family protein | PLIM_RS15400 | Q2I8V6 | - | 3878920 - 3879999 | 38355.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.