Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| inverse autotransporter beta domain-containing protein | PLIM_RS15305 | Not Available | + | 3851263 - 3855177 | 136406.0 |
| iron-sulfur cluster assembly accessory protein | PLIM_RS15315 | O32113 | - | 3855945 - 3856277 | 11848.9 |
| pmoa family protein | PLIM_RS15320 | Not Available | - | 3856458 - 3857450 | 36615.9 |
| ketopantoate reductase family protein | PLIM_RS15325 | O31717 | - | 3857672 - 3858643 | 34919.3 |
| hypothetical protein | PLIM_RS24770 | Not Available | - | 3858766 - 3859962 | 45059.1 |
| dmt family protein | PLIM_RS25055 | Not Available | - | 3860998 - 3861099 | 3593.43 |
| hypothetical protein | PLIM_RS15335 | Not Available | - | 3861229 - 3862725 | 57111.5 |
| 4'-phosphopantetheinyl transferase superfamily protein | PLIM_RS23065 | P37695 | + | 3863132 - 3863980 | 31169.3 |
| dna methyltransferase | PLIM_RS15345 | Not Available | + | 3864172 - 3867693 | 131890.0 |
| antitoxin family protein | PLIM_RS15350 | Not Available | + | 3868092 - 3868328 | 8797.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.