Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| u32 family peptidase | PLIM_RS15245 | P76104 | + | 3838578 - 3841211 | 96950.7 |
| helix-hairpin-helix domain-containing protein | PLIM_RS23060 | Not Available | + | 3841225 - 3841677 | 16498.7 |
| hypothetical protein | PLIM_RS15260 | Not Available | + | 3841948 - 3842349 | 15009.8 |
| rlua family pseudouridine synthase | PLIM_RS15265 | Q0KD76 | - | 3842392 - 3844194 | 67709.4 |
| hypothetical protein | PLIM_RS15270 | Not Available | + | 3844262 - 3845878 | 60955.4 |
| hypothetical protein | PLIM_RS15275 | Not Available | - | 3845908 - 3846402 | 18370.9 |
| hypothetical protein | PLIM_RS15280 | Not Available | - | 3846437 - 3846937 | 18893.6 |
| histidine triad nucleotide-binding protein | PLIM_RS15285 | P32084 | - | 3846963 - 3847370 | 14953.8 |
| lamg-like jellyroll fold domain-containing protein | PLIM_RS15290 | Not Available | + | 3847531 - 3849462 | 72116.1 |
| nad(p)-dependent alcohol dehydrogenase | PLIM_RS15295 | P74721 | + | 3849657 - 3850676 | 36515.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.