Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cbb3-type cytochrome c oxidase subunit i | PLIM_RS15195 | Q06473 | - | 3827046 - 3828803 | 65605.6 |
| cytochrome c oxidase subunit ii | PLIM_RS15200 | P98053 | - | 3828966 - 3829775 | 29939.3 |
| cytochrome c | PLIM_RS15205 | Not Available | - | 3829908 - 3831623 | 61880.7 |
| hypothetical protein | PLIM_RS15210 | Not Available | - | 3831745 - 3832017 | 9554.23 |
| hypothetical protein | PLIM_RS15220 | Not Available | + | 3832457 - 3833683 | 46204.6 |
| citrate/2-methylcitrate synthase | PLIM_RS15225 | P39120 | + | 3834017 - 3835138 | 40891.4 |
| threonine synthase | PLIM_RS15230 | Q58860 | + | 3835382 - 3836833 | 52560.6 |
| hypothetical protein | PLIM_RS15235 | Not Available | + | 3836982 - 3837482 | 19049.1 |
| nucleoside monophosphate kinase | PLIM_RS15240 | Q0W1W4 | - | 3837615 - 3838262 | 24617.4 |
| hypothetical protein | PLIM_RS24895 | Not Available | - | 3838255 - 3838386 | 4602.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.