Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS15140 | Not Available | - | 3814154 - 3814921 | 29132.5 |
| duf1501 domain-containing protein | PLIM_RS15145 | Not Available | - | 3815063 - 3816580 | 56131.2 |
| hypothetical protein | PLIM_RS15150 | Not Available | - | 3816649 - 3817239 | 21855.1 |
| psd1 and planctomycete cytochrome c domain-containing protein | PLIM_RS15155 | Not Available | - | 3817303 - 3820443 | 116368.0 |
| mfs transporter | PLIM_RS15160 | P76417 | - | 3820844 - 3822223 | 50492.9 |
| hypothetical protein | PLIM_RS23050 | Not Available | + | 3822605 - 3823042 | 15655.4 |
| cytochrome c oxidase subunit iv family protein | PLIM_RS15175 | Not Available | - | 3823422 - 3823802 | 13910.1 |
| cytochrome c oxidase subunit 3 | PLIM_RS15180 | Not Available | - | 3823860 - 3824915 | 38371.9 |
| heme o synthase | PLIM_RS15185 | Q01YC2 | - | 3824971 - 3825951 | 35128.7 |
| heme a synthase | PLIM_RS23055 | Not Available | - | 3825954 - 3826940 | 35413.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.