Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | PLIM_RS01220 | Not Available | + | 308317 - 308640 | 11816.2 |
| pitrilysin family protein | PLIM_RS01225 | P55679 | - | 308861 - 311692 | 103822.0 |
| hypothetical protein | PLIM_RS01230 | Not Available | - | 311933 - 313867 | 72145.9 |
| thioredoxin | PLIM_RS01235 | P0A4L1 | + | 314407 - 314736 | 11721.3 |
| hypothetical protein | PLIM_RS01240 | Not Available | - | 314896 - 315156 | 9528.64 |
| trna pseudouridine(13) synthase trud | PLIM_RS01245 | B8J7C8 | - | 315304 - 316470 | 42881.5 |
| peptide deformylase | PLIM_RS01250 | Q7UHZ5 | + | 316690 - 317280 | 22004.4 |
| sulfur carrier protein this | PLIM_RS01255 | Not Available | + | 317268 - 317504 | 8496.36 |
| clpp family protease | PLIM_RS01260 | Not Available | - | 317521 - 318204 | 25700.7 |
| hypothetical protein | PLIM_RS01265 | Not Available | + | 318453 - 318725 | 9546.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.