Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thioesterase family protein | PLIM_RS15090 | Not Available | + | 3799420 - 3799815 | 14891.0 |
| sigma-54 dependent transcriptional regulator | PLIM_RS15095 | Not Available | - | 3799843 - 3801417 | 57609.9 |
| mannose-1-phosphate guanylyltransferase | PLIM_RS15100 | P07874 | + | 3801849 - 3802931 | 39140.9 |
| duf1080 domain-containing protein | PLIM_RS15105 | Not Available | - | 3803019 - 3803669 | 24387.8 |
| pqq-binding-like beta-propeller repeat protein | PLIM_RS15110 | Not Available | - | 3803823 - 3805013 | 42636.9 |
| iron-containing alcohol dehydrogenase | PLIM_RS15115 | P0DJA2 | - | 3804995 - 3806197 | 42058.3 |
| pqq-binding-like beta-propeller repeat protein | PLIM_RS15120 | Not Available | - | 3806443 - 3808224 | 64507.8 |
| pqq-binding-like beta-propeller repeat protein | PLIM_RS15125 | Not Available | - | 3808360 - 3811164 | 102620.0 |
| fha domain-containing protein | PLIM_RS15130 | Not Available | - | 3811731 - 3812486 | 27728.7 |
| mbl fold metallo-hydrolase | PLIM_RS15135 | Not Available | + | 3813018 - 3813809 | 29801.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.