Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chaperonin groel | PLIM_RS15035 | Q7UM97 | - | 3787518 - 3789131 | 57101.0 |
| co-chaperone groes | PLIM_RS15040 | Q7UM98 | - | 3789291 - 3789581 | 10198.4 |
| chaperonin groel | PLIM_RS15045 | Q7UM99 | - | 3789728 - 3791419 | 59780.0 |
| sugar phosphate isomerase/epimerase | PLIM_RS15055 | Not Available | + | 3791806 - 3792789 | 35682.9 |
| hypothetical protein | PLIM_RS15060 | Not Available | - | 3792804 - 3793304 | 18096.9 |
| alpha/beta hydrolase | PLIM_RS15065 | Not Available | - | 3793567 - 3794502 | 34701.4 |
| s9 family peptidase | PLIM_RS15070 | Not Available | - | 3794628 - 3795827 | 44401.7 |
| putative sulfate/molybdate transporter | PLIM_RS15075 | Q9SL95 | - | 3795824 - 3797137 | 46564.1 |
| carboxypeptidase-like regulatory domain-containing protein | PLIM_RS23045 | Not Available | - | 3797329 - 3797730 | 13627.4 |
| duf1559 domain-containing protein | PLIM_RS15085 | Not Available | - | 3797846 - 3798946 | 38583.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.