Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ligase-associated dna damage response exonuclease | PLIM_RS14985 | Not Available | - | 3773935 - 3775023 | 40052.5 |
| yidh family protein | PLIM_RS14990 | Not Available | - | 3775390 - 3775851 | 16554.2 |
| hypoxanthine phosphoribosyltransferase | PLIM_RS14995 | O33799 | + | 3776077 - 3776625 | 20173.4 |
| cyanophycinase | PLIM_RS15000 | Q8KQN8 | - | 3776608 - 3778032 | 52426.5 |
| hypothetical protein | PLIM_RS23040 | Not Available | - | 3778282 - 3780570 | 82834.3 |
| hypothetical protein | PLIM_RS15010 | Not Available | + | 3780900 - 3783392 | 92073.0 |
| type i restriction endonuclease | PLIM_RS15015 | Not Available | + | 3783683 - 3784807 | 42560.0 |
| fmdb family zinc ribbon protein | PLIM_RS15020 | Not Available | - | 3784950 - 3785276 | 10993.5 |
| nucleotide exchange factor grpe | PLIM_RS15025 | P95333 | - | 3785513 - 3786034 | 19225.7 |
| molecular chaperone dnaj | PLIM_RS15030 | Q7UM96 | - | 3786175 - 3787305 | 41179.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.