Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-hydrate epimerase | PLIM_RS14885 | D5SRZ4 | - | 3752945 - 3753718 | 27896.5 |
| parb/repb/spo0j family partition protein | PLIM_RS14890 | Q83AH2 | + | 3753931 - 3754875 | 34811.4 |
| hypothetical protein | PLIM_RS14895 | Not Available | - | 3754952 - 3756109 | 43473.9 |
| hypothetical protein | PLIM_RS14900 | Not Available | - | 3756133 - 3757158 | 37363.0 |
| hypothetical protein | PLIM_RS24890 | Not Available | - | 3757203 - 3757328 | 4202.08 |
| duf1559 domain-containing protein | PLIM_RS14905 | Not Available | - | 3757475 - 3758476 | 35716.6 |
| helix-turn-helix domain-containing protein | PLIM_RS14910 | Not Available | - | 3759069 - 3759638 | 21339.4 |
| sirohydrochlorin chelatase | PLIM_RS14915 | Not Available | - | 3759743 - 3760141 | 14356.6 |
| orotidine-5'-phosphate decarboxylase | PLIM_RS14920 | Q7UIA4 | - | 3760143 - 3761105 | 34109.5 |
| alpha/beta hydrolase | PLIM_RS14925 | D5EV35 | - | 3761166 - 3762167 | 35828.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.