Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | PLIM_RS14810 | Q2FV54 | - | 3735378 - 3736535 | 43069.1 |
| efflux rnd transporter permease subunit | PLIM_RS14815 | Not Available | + | 3736901 - 3740098 | 114885.0 |
| heat repeat domain-containing protein | PLIM_RS14820 | Not Available | - | 3740309 - 3743854 | 121326.0 |
| duf1559 domain-containing protein | PLIM_RS14835 | Not Available | - | 3744068 - 3745363 | 45955.3 |
| hypothetical protein | PLIM_RS14845 | Not Available | - | 3745986 - 3746414 | 16242.5 |
| hypothetical protein | PLIM_RS14850 | Not Available | - | 3746451 - 3747272 | 30902.5 |
| hypothetical protein | PLIM_RS14860 | Not Available | + | 3747682 - 3749361 | 64110.2 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | PLIM_RS14870 | P77434 | + | 3749764 - 3750999 | 45448.0 |
| hypothetical protein | PLIM_RS14875 | Not Available | + | 3751297 - 3751872 | 20617.9 |
| type ii secretion system major pseudopilin gspg | PLIM_RS14880 | Q00514 | - | 3752233 - 3752715 | 17330.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.