Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS24435 | Not Available | - | 3691654 - 3691830 | 6416.74 |
| tolc family protein | PLIM_RS14640 | Q8CWA4 | - | 3692102 - 3693685 | 58394.1 |
| efflux rnd transporter permease subunit | PLIM_RS14645 | Not Available | - | 3693654 - 3696824 | 115778.0 |
| efflux rnd transporter periplasmic adaptor subunit | PLIM_RS14650 | Not Available | - | 3696837 - 3698225 | 52300.2 |
| helix-turn-helix domain-containing protein | PLIM_RS14665 | Not Available | - | 3699532 - 3700104 | 21246.8 |
| exo-alpha-sialidase | PLIM_RS14670 | P31206 | - | 3701355 - 3702632 | 45828.0 |
| gfo/idh/moca family protein | PLIM_RS14675 | Not Available | + | 3702976 - 3704319 | 49793.0 |
| abc transporter substrate-binding protein | PLIM_RS14680 | Not Available | + | 3704978 - 3706132 | 40468.2 |
| stas domain-containing protein | PLIM_RS14685 | Not Available | + | 3706149 - 3707438 | 46174.9 |
| abc transporter permease | PLIM_RS14690 | Q9ZDG1 | + | 3707435 - 3708376 | 33253.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.