Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1559 domain-containing protein | PLIM_RS14585 | Not Available | - | 3676516 - 3677562 | 37319.1 |
| radical sam/spasm domain-containing protein | PLIM_RS14590 | Not Available | - | 3677788 - 3679020 | 46234.9 |
| gtp-binding protein | PLIM_RS14595 | Not Available | - | 3679104 - 3680258 | 40980.1 |
| abc transporter substrate-binding protein | PLIM_RS14600 | Not Available | - | 3680472 - 3682010 | 55224.3 |
| nad-dependent dna ligase liga | PLIM_RS14605 | Q7UKD1 | - | 3682259 - 3684382 | 78229.7 |
| hypothetical protein | PLIM_RS14610 | Not Available | - | 3684505 - 3684993 | 17457.4 |
| npcbm/new2 domain-containing protein | PLIM_RS14615 | Not Available | - | 3685216 - 3687039 | 66637.2 |
| hypothetical protein | PLIM_RS14620 | Not Available | + | 3687543 - 3687902 | 13264.1 |
| hypothetical protein | PLIM_RS14625 | Not Available | + | 3688100 - 3688504 | 14895.1 |
| serine/threonine-protein kinase | PLIM_RS23030 | Q6MAN0 | - | 3688564 - 3691491 | 107519.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.