Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | PLIM_RS01160 | Not Available | + | 294702 - 295391 | 26122.3 |
| folate-binding protein ygfz | PLIM_RS22225 | Not Available | - | 295413 - 296402 | 36332.3 |
| ribonuclease iii | PLIM_RS01170 | Q7UGZ7 | - | 296512 - 297303 | 28707.4 |
| hypothetical protein | PLIM_RS01180 | Not Available | + | 297755 - 298828 | 39807.5 |
| sufe family protein | PLIM_RS01185 | Not Available | + | 298915 - 299328 | 15391.7 |
| pqq-binding-like beta-propeller repeat protein | PLIM_RS01190 | Not Available | - | 299356 - 303783 | 164057.0 |
| rna polymerase sigma factor | PLIM_RS22230 | Not Available | - | 303865 - 304419 | 21037.6 |
| alpha/beta hydrolase | PLIM_RS01200 | Q54T49 | - | 304469 - 305206 | 26587.9 |
| atp-binding protein | PLIM_RS01205 | Q06067 | - | 305307 - 307133 | 66460.6 |
| 50s ribosomal protein l27 | PLIM_RS01215 | B2UNV3 | + | 307388 - 307651 | 9500.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.