Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hisf | PLIM_RS14535 | Q7UKJ9 | - | 3665726 - 3666511 | 28327.9 |
| hypothetical protein | PLIM_RS14540 | Not Available | - | 3666682 - 3667002 | 12455.7 |
| hypothetical protein | PLIM_RS24590 | Not Available | - | 3667438 - 3667611 | 6229.79 |
| hypothetical protein | PLIM_RS14550 | Not Available | - | 3667684 - 3668124 | 17171.8 |
| prenyltransferase/squalene oxidase repeat-containing protein | PLIM_RS14555 | Not Available | - | 3668139 - 3669197 | 38948.2 |
| pyrroline-5-carboxylate reductase | PLIM_RS14560 | Q9HH99 | + | 3669587 - 3670426 | 28051.2 |
| hypothetical protein | PLIM_RS14565 | Not Available | + | 3670689 - 3671840 | 41358.8 |
| polysaccharide biosynthesis/export family protein | PLIM_RS23025 | Not Available | + | 3671837 - 3673747 | 68396.0 |
| smc-scp complex subunit scpb | PLIM_RS14575 | Q9CG34 | + | 3673832 - 3674743 | 33745.6 |
| glycosyltransferase | PLIM_RS14580 | Q9SRT3 | - | 3674785 - 3676356 | 59622.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.