Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2760 domain-containing protein | PLIM_RS14430 | Not Available | - | 3646056 - 3646616 | 20114.9 |
| homoserine dehydrogenase | PLIM_RS14435 | P29365 | - | 3646719 - 3648032 | 46957.0 |
| menaquinone biosynthetic enzyme mqna/mqnd family protein | PLIM_RS14440 | Not Available | + | 3648268 - 3649164 | 33306.8 |
| cyclic dehypoxanthinyl futalosine synthase | PLIM_RS14445 | Q9K864 | + | 3649133 - 3650341 | 45050.0 |
| hypothetical protein | PLIM_RS14450 | Not Available | - | 3650518 - 3650925 | 13416.0 |
| duf1559 domain-containing protein | PLIM_RS14455 | Not Available | + | 3651122 - 3652141 | 36302.5 |
| rid family hydrolase | PLIM_RS14460 | P0AEB8 | + | 3652500 - 3652856 | 13165.7 |
| rlua family pseudouridine synthase | PLIM_RS23015 | P50513 | - | 3653348 - 3654538 | 44286.0 |
| inorganic phosphate transporter | PLIM_RS14470 | O30499 | - | 3654701 - 3655669 | 32901.5 |
| sulfurtransferase | PLIM_RS14475 | P27477 | - | 3655726 - 3656703 | 36113.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.