Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rrf2 family transcriptional regulator | PLIM_RS14280 | O68025 | - | 3605551 - 3606015 | 17242.0 |
| hypothetical protein | PLIM_RS14290 | Not Available | + | 3606309 - 3606581 | 9967.12 |
| hypothetical protein | PLIM_RS14295 | Not Available | - | 3606808 - 3607233 | 14492.2 |
| hypothetical protein | PLIM_RS14300 | Not Available | - | 3607414 - 3609768 | 87988.2 |
| pqq-binding-like beta-propeller repeat protein | PLIM_RS14305 | Not Available | - | 3610029 - 3614894 | 178143.0 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | PLIM_RS14310 | Q7UHU7 | + | 3615301 - 3616368 | 38998.8 |
| ta system antitoxin pard family protein | PLIM_RS24580 | Not Available | + | 3617704 - 3618081 | 13750.1 |
| zeta toxin family protein | PLIM_RS14320 | Not Available | + | 3618078 - 3618641 | 21085.2 |
| hypothetical protein | PLIM_RS14325 | Not Available | - | 3618710 - 3619135 | 14585.4 |
| duf1559 domain-containing protein | PLIM_RS14330 | Not Available | - | 3619284 - 3620222 | 34230.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.