Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS01110 | Not Available | - | 281104 - 284733 | 128407.0 |
| hypothetical protein | PLIM_RS01115 | Not Available | + | 285370 - 285630 | 9309.91 |
| pqq-binding-like beta-propeller repeat protein | PLIM_RS01120 | Not Available | + | 285885 - 287228 | 49312.7 |
| tade/tadg family type iv pilus assembly protein | PLIM_RS01125 | Not Available | - | 287285 - 287716 | 16103.4 |
| vwa domain-containing protein | PLIM_RS01130 | Not Available | - | 287713 - 288906 | 42036.0 |
| tade/tadg family type iv pilus assembly protein | PLIM_RS22210 | Not Available | - | 288945 - 289364 | 15220.8 |
| duf4114 domain-containing protein | PLIM_RS22215 | Not Available | - | 289455 - 290237 | 28617.1 |
| hypothetical protein | PLIM_RS01145 | Not Available | + | 290633 - 291445 | 29913.8 |
| serine/threonine-protein kinase | PLIM_RS22220 | Q9CEF5 | + | 291689 - 293386 | 62322.8 |
| hypothetical protein | PLIM_RS01155 | Not Available | + | 293491 - 294666 | 41823.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.