Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | PLIM_RS01050 | Not Available | + | 266746 - 267804 | 38973.5 |
| hypothetical protein | PLIM_RS01055 | Not Available | + | 267804 - 268061 | 10288.4 |
| hypothetical protein | PLIM_RS01060 | Not Available | - | 268083 - 268391 | 11374.6 |
| hypothetical protein | PLIM_RS01065 | Not Available | + | 268898 - 270574 | 59142.0 |
| pilz domain-containing protein | PLIM_RS01070 | Not Available | + | 270787 - 271152 | 13466.0 |
| heat repeat domain-containing protein | PLIM_RS01075 | Not Available | - | 271232 - 273004 | 64071.9 |
| dna primase | PLIM_RS22205 | Q9I5W0 | + | 274281 - 276314 | 75533.8 |
| rna polymerase sigma factor rpod | PLIM_RS24920 | P56835 | + | 276985 - 278637 | 64098.9 |
| abc transporter permease | PLIM_RS01100 | Not Available | + | 278831 - 279658 | 30121.8 |
| duf420 domain-containing protein | PLIM_RS23500 | O31845 | + | 279736 - 281070 | 49096.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.