Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | PLIM_RS00940 | Q2RK34 | - | 239833 - 240675 | 30213.3 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | PLIM_RS00945 | A5G6S0 | + | 240918 - 242204 | 48197.2 |
| para family protein | PLIM_RS00950 | Not Available | - | 242436 - 243455 | 37320.4 |
| atp-dependent dna helicase | PLIM_RS00955 | P76257 | - | 243674 - 245653 | 73628.4 |
| hypothetical protein | PLIM_RS00960 | Not Available | + | 245960 - 247624 | 61685.7 |
| hypothetical protein | PLIM_RS00965 | Not Available | + | 247709 - 248947 | 46912.1 |
| formyltransferase family protein | PLIM_RS00970 | P0A440 | + | 249073 - 249936 | 32172.8 |
| m14 family metallopeptidase | PLIM_RS00975 | Not Available | - | 249980 - 251875 | 70768.2 |
| hypothetical protein | PLIM_RS00985 | Not Available | - | 251936 - 252241 | 11536.1 |
| carboxylating nicotinate-nucleotide diphosphorylase | PLIM_RS00990 | P77938 | + | 252419 - 253309 | 31811.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.