Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f1 subunit gamma | PLIM_RS00885 | Q7UFB6 | + | 230003 - 230896 | 32861.9 |
| f0f1 atp synthase subunit beta | PLIM_RS00890 | Q7UFB5 | + | 231038 - 232483 | 51995.3 |
| f0f1 atp synthase subunit epsilon | PLIM_RS00895 | Q7UFB4 | + | 232627 - 233028 | 14477.4 |
| 50s ribosomal protein l19 | PLIM_RS00900 | Q7UI13 | - | 233232 - 233597 | 13809.8 |
| trna (guanosine(37)-n1)-methyltransferase trmd | PLIM_RS00905 | Q7TTY8 | - | 233685 - 234422 | 27397.0 |
| 30s ribosomal protein s16 | PLIM_RS00910 | Q7UI12 | - | 234528 - 234887 | 13149.0 |
| signal recognition particle protein | PLIM_RS00915 | P37105 | - | 235097 - 236572 | 54179.9 |
| hypothetical protein | PLIM_RS00925 | Not Available | + | 236983 - 237336 | 13038.5 |
| hypothetical protein | PLIM_RS00930 | Not Available | + | 237413 - 237904 | 18507.9 |
| arsenical pump-driving atpase | PLIM_RS00935 | P08690 | - | 237964 - 239775 | 64835.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.