Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS00835 | Not Available | + | 220077 - 220403 | 11321.4 |
| s1c family serine protease | PLIM_RS00840 | Not Available | - | 220647 - 221819 | 43194.7 |
| duf4912 domain-containing protein | PLIM_RS24495 | Not Available | - | 222093 - 222848 | 27488.6 |
| hypothetical protein | PLIM_RS24500 | Not Available | + | 223057 - 223266 | 7546.81 |
| hypothetical protein | PLIM_RS00855 | Not Available | + | 224631 - 225104 | 16590.8 |
| f0f1 atp synthase subunit a | PLIM_RS00860 | A5VNW2 | + | 225203 - 226222 | 37046.0 |
| atp synthase f0 subunit c | PLIM_RS00865 | Q8A9V0 | + | 226377 - 226667 | 9362.02 |
| f0f1 atp synthase subunit b | PLIM_RS00870 | Q7UFB9 | + | 226971 - 227687 | 26260.1 |
| atp synthase f1 subunit delta | PLIM_RS22190 | Q3B144 | + | 227768 - 228397 | 23127.8 |
| f0f1 atp synthase subunit alpha | PLIM_RS00880 | Q7UFB7 | + | 228354 - 229865 | 54046.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.