Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| httm domain-containing protein | PLIM_RS00770 | Not Available | - | 205231 - 206832 | 60303.1 |
| hypothetical protein | PLIM_RS00775 | Not Available | - | 207004 - 207774 | 29059.2 |
| type ii secretion system f family protein | PLIM_RS00785 | P31743 | - | 208161 - 209369 | 43646.0 |
| had family hydrolase | PLIM_RS22180 | P0A8Y2 | - | 209587 - 210339 | 29138.6 |
| tetraacyldisaccharide 4'-kinase | PLIM_RS22185 | Q7UNW7 | - | 210346 - 211473 | 42208.1 |
| yifb family mg chelatase-like aaa atpase | PLIM_RS00800 | P57015 | - | 211666 - 213201 | 55229.7 |
| duf1559 domain-containing protein | PLIM_RS00805 | Not Available | + | 213763 - 214851 | 37936.5 |
| duf1559 domain-containing protein | PLIM_RS00810 | Not Available | + | 215149 - 216234 | 38305.9 |
| duf1559 domain-containing protein | PLIM_RS00820 | Not Available | + | 216796 - 217887 | 38632.5 |
| glutamine-hydrolyzing gmp synthase | PLIM_RS00825 | Q7UFS3 | + | 218108 - 219685 | 57828.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.