Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nramp family divalent metal transporter | PLIM_RS00720 | Not Available | - | 192751 - 194586 | 66412.5 |
| coproporphyrinogen-iii oxidase family protein | PLIM_RS00725 | P52062 | + | 195137 - 196534 | 52702.8 |
| hypothetical protein | PLIM_RS00730 | Not Available | + | 196602 - 197138 | 19896.4 |
| atp-grasp domain-containing protein | PLIM_RS00735 | Not Available | + | 197245 - 198054 | 29560.9 |
| arsenite efflux transporter metallochaperone arsd | PLIM_RS00740 | P46003 | - | 198157 - 198501 | 12426.1 |
| carbon starvation protein a | PLIM_RS00745 | O67304 | + | 198775 - 200559 | 64489.3 |
| polyprenyl synthetase family protein | PLIM_RS00750 | O24743 | + | 200966 - 201982 | 37494.8 |
| ligase-associated dna damage response exonuclease | PLIM_RS00755 | B1ZZL9 | + | 202173 - 203240 | 39780.1 |
| hypothetical protein | PLIM_RS00760 | Not Available | - | 203431 - 204027 | 22514.8 |
| stas domain-containing protein | PLIM_RS00765 | Not Available | + | 204712 - 205101 | 14423.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.