Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS00660 | Not Available | - | 179349 - 180119 | 27892.2 |
| cyclic pyranopterin monophosphate synthase moac | PLIM_RS00665 | B6IQ15 | - | 180116 - 180592 | 16544.0 |
| hisa/hisf-related tim barrel protein | PLIM_RS00670 | Not Available | + | 180690 - 181580 | 33041.2 |
| 3-deoxy-7-phosphoheptulonate synthase | PLIM_RS00675 | P00888 | - | 181637 - 182701 | 38984.9 |
| pyridoxal phosphate-dependent aminotransferase | PLIM_RS00680 | Q59228 | - | 182998 - 184221 | 43621.3 |
| hypothetical protein | PLIM_RS23940 | Not Available | + | 184974 - 185276 | 9597.88 |
| mfs transporter | PLIM_RS00690 | Not Available | - | 185434 - 186747 | 46364.3 |
| sigma-54 dependent transcriptional regulator | PLIM_RS00695 | Not Available | + | 187339 - 188874 | 56603.0 |
| duf4375 domain-containing protein | PLIM_RS22170 | Not Available | - | 189098 - 190543 | 53787.1 |
| sumf1/egtb/pvdo family nonheme iron enzyme | PLIM_RS22175 | Not Available | - | 191177 - 192547 | 48228.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.