Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS00610 | Not Available | + | 167574 - 168923 | 49378.1 |
| duf6940 family protein | PLIM_RS00615 | Not Available | + | 168935 - 169525 | 21864.1 |
| l,d-transpeptidase family protein | PLIM_RS22160 | O34816 | + | 169655 - 170845 | 43674.1 |
| hypothetical protein | PLIM_RS00625 | Not Available | + | 171080 - 171760 | 24998.8 |
| dinb family protein | PLIM_RS00630 | Not Available | + | 171841 - 172326 | 17630.5 |
| hypothetical protein | PLIM_RS22165 | Not Available | - | 172487 - 173320 | 31025.6 |
| abc transporter permease | PLIM_RS00640 | Q02MI4 | - | 173405 - 174763 | 48842.6 |
| duf1552 domain-containing protein | PLIM_RS00645 | Not Available | - | 174836 - 176230 | 51542.2 |
| duf1592 domain-containing protein | PLIM_RS00650 | Not Available | - | 176475 - 178358 | 71013.0 |
| hypothetical protein | PLIM_RS00655 | Not Available | + | 178874 - 179221 | 12053.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.