Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | PLIM_RS08950 | Not Available | - | 2244217 - 2246349 | 78709.8 |
| duf1549 domain-containing protein | PLIM_RS08960 | Not Available | + | 2246742 - 2248439 | 64292.0 |
| duf1501 domain-containing protein | PLIM_RS08965 | Not Available | + | 2248560 - 2249909 | 49058.3 |
| wd40 repeat domain-containing protein | PLIM_RS08970 | Not Available | + | 2249936 - 2250979 | 38171.2 |
| dna polymerase/3'-5' exonuclease polx | PLIM_RS08975 | P94544 | + | 2251413 - 2253125 | 62753.3 |
| hypothetical protein | PLIM_RS08985 | Not Available | + | 2253510 - 2253884 | 14101.6 |
| atp-dependent clp protease atp-binding subunit clpx | PLIM_RS08995 | Q7UKU7 | + | 2254225 - 2255508 | 46833.4 |
| fha domain-containing protein | PLIM_RS22720 | Not Available | + | 2255811 - 2256620 | 28480.4 |
| duf4440 domain-containing protein | PLIM_RS09005 | Q3MHJ9 | + | 2256817 - 2257212 | 14413.3 |
| hypothetical protein | PLIM_RS09010 | Not Available | + | 2257271 - 2257744 | 16306.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.