Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl synthase | PLIM_RS08790 | Not Available | + | 2198320 - 2199612 | 46119.1 |
| alkaline phosphatase | PLIM_RS08795 | P42251 | - | 2199725 - 2201329 | 60320.0 |
| mota/tolq/exbb proton channel family protein | PLIM_RS08800 | Not Available | + | 2201722 - 2202429 | 26248.0 |
| biopolymer transporter exbd | PLIM_RS08805 | Not Available | + | 2202426 - 2202947 | 18762.3 |
| biopolymer transporter exbd | PLIM_RS08810 | Not Available | + | 2202951 - 2203703 | 27710.3 |
| pqq-binding-like beta-propeller repeat protein | PLIM_RS08815 | Not Available | + | 2203703 - 2207254 | 128990.0 |
| abc transporter substrate-binding protein | PLIM_RS08820 | Not Available | + | 2207251 - 2209857 | 97646.9 |
| hypothetical protein | PLIM_RS08825 | Not Available | + | 2209854 - 2211482 | 59302.0 |
| chorismate synthase | PLIM_RS08830 | B1XIM6 | + | 2211563 - 2212717 | 40751.6 |
| secondary thiamine-phosphate synthase enzyme yjbq | PLIM_RS08835 | P0AF49 | + | 2212749 - 2213171 | 15555.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.