Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS00565 | Not Available | + | 151907 - 152692 | 28284.3 |
| gfo/idh/moca family protein | PLIM_RS00570 | Not Available | - | 153301 - 154728 | 52118.8 |
| hypothetical protein | PLIM_RS00575 | Not Available | - | 154834 - 155712 | 33655.8 |
| hypothetical protein | PLIM_RS23935 | Not Available | - | 156413 - 157003 | 18665.9 |
| pp2c family protein-serine/threonine phosphatase | PLIM_RS00585 | Q9Y233 | + | 157477 - 158766 | 48219.9 |
| l-serine ammonia-lyase | PLIM_RS00590 | O86564 | + | 158867 - 160249 | 49013.2 |
| fad-dependent oxidoreductase | PLIM_RS00595 | Not Available | + | 160405 - 161856 | 51445.7 |
| crispr-associated csm1 family protein | PLIM_RS24320 | Not Available | + | 161969 - 162136 | 5941.23 |
| pas domain s-box protein | PLIM_RS22150 | Not Available | - | 162257 - 166942 | 175861.0 |
| hypothetical protein | PLIM_RS22155 | Not Available | - | 167057 - 167344 | 11110.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.