Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PLIM_RS08635 | Q9X5P2 | + | 2149117 - 2149983 | 32827.6 |
| hypothetical protein | PLIM_RS08640 | Not Available | + | 2150186 - 2150752 | 21368.4 |
| thua domain-containing protein | PLIM_RS24535 | Not Available | + | 2150951 - 2152447 | 55629.6 |
| hypothetical protein | PLIM_RS08650 | Not Available | + | 2152643 - 2153311 | 24999.8 |
| cog3014 family protein | PLIM_RS08655 | Not Available | + | 2153341 - 2154786 | 53036.3 |
| arac family transcriptional regulator | PLIM_RS08660 | Not Available | - | 2154806 - 2155591 | 28342.0 |
| bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | PLIM_RS08665 | C5D4J5 | + | 2155744 - 2159016 | 121873.0 |
| type i polyketide synthase | PLIM_RS08670 | P96284 | + | 2159526 - 2170109 | 380383.0 |
| 4'-phosphopantetheinyl transferase superfamily protein | PLIM_RS08675 | Not Available | + | 2170151 - 2170915 | 28950.4 |
| sdr family oxidoreductase | PLIM_RS08680 | P71079 | + | 2170976 - 2171740 | 26978.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.