Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS08530 | Not Available | - | 2122533 - 2123090 | 19577.6 |
| aldo/keto reductase | PLIM_RS08540 | O81884 | - | 2123579 - 2124550 | 36246.4 |
| rbsd/fucu family protein | PLIM_RS08545 | Not Available | - | 2124617 - 2125063 | 15834.3 |
| duf188 domain-containing protein | PLIM_RS08550 | Q7UXZ8 | - | 2125172 - 2125687 | 18712.4 |
| arylsulfatase | PLIM_RS08555 | Not Available | - | 2125845 - 2127464 | 59689.1 |
| abc-f family atp-binding cassette domain-containing protein | PLIM_RS08560 | O05519 | + | 2127853 - 2129637 | 66026.9 |
| na+/h+ antiporter nhaa | PLIM_RS08565 | Q7UTY3 | - | 2129643 - 2131049 | 49827.2 |
| atp-binding cassette domain-containing protein | PLIM_RS08570 | Q57242 | - | 2131249 - 2133174 | 72290.9 |
| pas domain-containing sensor histidine kinase | PLIM_RS08575 | P0DOA0 | + | 2133532 - 2136219 | 101003.0 |
| duf1570 domain-containing protein | PLIM_RS08580 | Not Available | - | 2136232 - 2137305 | 41362.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.