Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | PLIM_RS08420 | Q4ZSZ3 | + | 2097686 - 2098528 | 32423.9 |
| atp-dependent zinc metalloprotease ftsh | PLIM_RS08425 | Q7UUZ7 | + | 2098868 - 2100820 | 71750.5 |
| hypothetical protein | PLIM_RS08430 | Not Available | - | 2101158 - 2101349 | 6228.58 |
| duf1559 domain-containing protein | PLIM_RS08435 | Not Available | - | 2101465 - 2102463 | 35464.6 |
| hypothetical protein | PLIM_RS24120 | Not Available | - | 2102980 - 2103195 | 7690.08 |
| duf1559 domain-containing protein | PLIM_RS08445 | Not Available | - | 2103491 - 2104495 | 35719.8 |
| thua domain-containing protein | PLIM_RS08450 | Not Available | - | 2104748 - 2105668 | 33707.6 |
| tetratricopeptide repeat protein | PLIM_RS08455 | Not Available | + | 2106038 - 2108008 | 69088.0 |
| polyprenol monophosphomannose synthase | PLIM_RS08460 | C5CBV8 | + | 2108222 - 2108983 | 28709.7 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | PLIM_RS08465 | B8FFR9 | - | 2108984 - 2109829 | 29784.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.