Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat domain-containing protein | PLIM_RS08320 | Not Available | - | 2068466 - 2070289 | 68102.8 |
| hypothetical protein | PLIM_RS08325 | Not Available | - | 2070523 - 2071074 | 20603.9 |
| rhs repeat domain-containing protein | PLIM_RS08330 | Not Available | - | 2071055 - 2073316 | 85580.6 |
| rhs repeat domain-containing protein | PLIM_RS08335 | Not Available | - | 2074085 - 2076757 | 99589.0 |
| imm74 family immunity protein | PLIM_RS08340 | Not Available | - | 2076990 - 2077223 | 8591.04 |
| hypothetical protein | PLIM_RS08345 | Not Available | - | 2077608 - 2077925 | 11891.0 |
| aminotransferase class v-fold plp-dependent enzyme | PLIM_RS08350 | Not Available | - | 2078211 - 2079410 | 44845.0 |
| class i mannose-6-phosphate isomerase | PLIM_RS08355 | Not Available | + | 2079634 - 2080857 | 45207.4 |
| uma2 family endonuclease | PLIM_RS22695 | Not Available | + | 2081013 - 2081612 | 22111.4 |
| sugar phosphate isomerase/epimerase | PLIM_RS08365 | Not Available | + | 2081658 - 2082686 | 37644.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.