Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rhomboid family intramembrane serine protease | PLIM_RS08245 | Not Available | + | 2048844 - 2049734 | 33529.8 |
| Trna-arg | Not Available | Not Available | + | 2049855 - 2049928 | Not Available |
| bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argj | PLIM_RS08255 | Q7UUJ7 | - | 2050138 - 2051331 | 41221.4 |
| duf1579 domain-containing protein | PLIM_RS08265 | Not Available | + | 2051829 - 2052329 | 18993.5 |
| hypothetical protein | PLIM_RS08280 | Not Available | - | 2053941 - 2055980 | 75503.9 |
| methyltransferase | PLIM_RS08285 | Q9X5T6 | - | 2056061 - 2057143 | 40458.8 |
| excinuclease abc subunit uvra | PLIM_RS08295 | Q829X3 | - | 2057839 - 2065143 | 266672.0 |
| hlyd family secretion protein | PLIM_RS08305 | Not Available | + | 2065852 - 2067114 | 45285.1 |
| hypothetical protein | PLIM_RS24110 | Not Available | - | 2067392 - 2067772 | 12862.1 |
| hypothetical protein | PLIM_RS24115 | Not Available | - | 2068134 - 2068442 | 11996.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.