Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein | PLIM_RS22685 | Q81AF4 | - | 2033269 - 2034024 | 28207.6 |
| hypothetical protein | PLIM_RS08195 | Not Available | - | 2034246 - 2035766 | 55511.3 |
| pa14 domain-containing protein | PLIM_RS08200 | Not Available | - | 2035818 - 2038727 | 106584.0 |
| tolc family protein | PLIM_RS08205 | Not Available | - | 2038990 - 2040561 | 57970.2 |
| efflux rnd transporter permease subunit | PLIM_RS08210 | P94177 | - | 2040660 - 2043809 | 114246.0 |
| efflux rnd transporter periplasmic adaptor subunit | PLIM_RS08215 | Not Available | - | 2043879 - 2045390 | 55254.6 |
| hypothetical protein | PLIM_RS08220 | Not Available | + | 2045528 - 2045713 | 6903.32 |
| hypothetical protein | PLIM_RS08225 | Not Available | - | 2045756 - 2046214 | 16499.7 |
| biotin--[acetyl-coa-carboxylase] ligase | PLIM_RS22690 | Not Available | + | 2046741 - 2047565 | 30396.4 |
| rna-binding protein | PLIM_RS08235 | Q9WX37 | + | 2047963 - 2048403 | 13873.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.