Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | PLIM_RS08140 | P0A2D0 | + | 2022674 - 2023417 | 25981.2 |
| duf4291 family protein | PLIM_RS08145 | Not Available | + | 2023477 - 2024118 | 24386.0 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | PLIM_RS08150 | A7NI97 | + | 2024150 - 2025646 | 54216.8 |
| holo-acp synthase | PLIM_RS08155 | Q1IHY2 | - | 2025612 - 2026007 | 14797.2 |
| hypothetical protein | PLIM_RS08160 | Not Available | - | 2026117 - 2026785 | 25469.1 |
| a24 family peptidase | PLIM_RS22675 | P72640 | - | 2026798 - 2027973 | 42746.9 |
| hd-gyp domain-containing protein | PLIM_RS22680 | Q9WY30 | - | 2028101 - 2029786 | 63005.5 |
| hypothetical protein | PLIM_RS08175 | Not Available | - | 2030307 - 2031173 | 32795.3 |
| sdr family nad(p)-dependent oxidoreductase | PLIM_RS08180 | Q9L9F8 | + | 2031375 - 2032163 | 28464.0 |
| iron-containing alcohol dehydrogenase family protein | PLIM_RS08185 | A8ABP9 | + | 2032212 - 2033258 | 37806.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.