Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| eboa domain-containing protein | PLIM_RS08030 | Not Available | + | 1995188 - 1996135 | 35418.9 |
| tatd family hydrolase | PLIM_RS08035 | Q58171 | + | 1996252 - 1997163 | 34212.6 |
| stas domain-containing protein | PLIM_RS08040 | Not Available | + | 1997434 - 1997784 | 12711.7 |
| serine hydrolase | PLIM_RS08045 | Q9KX40 | + | 1997853 - 1998980 | 41428.6 |
| tlpa disulfide reductase family protein | PLIM_RS08050 | Not Available | - | 1999028 - 1999552 | 18795.7 |
| hypothetical protein | PLIM_RS08055 | Not Available | - | 1999594 - 2001165 | 57707.7 |
| hypothetical protein | PLIM_RS24105 | Not Available | - | 2001236 - 2002201 | 35437.9 |
| uroporphyrinogen-iii c-methyltransferase | PLIM_RS08070 | Q59294 | + | 2002458 - 2004095 | 59517.0 |
| redoxin domain-containing protein | PLIM_RS08075 | Not Available | + | 2004309 - 2006342 | 75362.5 |
| phosphoribosyl-atp pyrophosphatase | PLIM_RS08080 | Not Available | - | 2006381 - 2006677 | 11011.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.