Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamate 5-kinase | PLIM_RS07985 | Q2RKZ7 | + | 1984322 - 1985503 | 42256.8 |
| hypothetical protein | PLIM_RS24370 | Not Available | + | 1985652 - 1985795 | 6008.21 |
| hypothetical protein | PLIM_RS07990 | Not Available | - | 1985812 - 1986477 | 23415.3 |
| membrane protein insertion efficiency factor yidd | PLIM_RS07995 | Q2JQD1 | - | 1986612 - 1986965 | 13163.9 |
| ribonuclease p protein component | PLIM_RS08000 | Q7UNR1 | - | 1986962 - 1987450 | 18329.9 |
| type i 3-dehydroquinate dehydratase | PLIM_RS08005 | A6VGY0 | + | 1987703 - 1989160 | 53055.3 |
| hypothetical protein | PLIM_RS08010 | Not Available | - | 1989189 - 1989833 | 23080.0 |
| hypothetical protein | PLIM_RS08015 | Not Available | + | 1990377 - 1993385 | 110034.0 |
| porphobilinogen synthase | PLIM_RS08020 | P45622 | - | 1993565 - 1994626 | 38565.0 |
| hypothetical protein | PLIM_RS08025 | Not Available | + | 1994815 - 1995078 | 9144.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.