Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose 3,5-epimerase | PLIM_RS07930 | Q9HU21 | - | 1970313 - 1970858 | 20606.3 |
| sis domain-containing protein | PLIM_RS07935 | B9KFJ1 | - | 1970855 - 1971469 | 22622.8 |
| hypothetical protein | PLIM_RS07940 | Not Available | - | 1971669 - 1972619 | 34952.3 |
| ammonium transporter | PLIM_RS07945 | P54147 | - | 1972868 - 1974406 | 53040.8 |
| gfo/idh/moca family protein | PLIM_RS07955 | Not Available | + | 1975206 - 1976657 | 53305.0 |
| redoxin domain-containing protein | PLIM_RS07960 | Not Available | - | 1976945 - 1978981 | 75762.3 |
| hypothetical protein | PLIM_RS07965 | Not Available | + | 1979196 - 1980710 | 57196.7 |
| serine/threonine-protein kinase | PLIM_RS07970 | Not Available | - | 1980783 - 1982369 | 57401.0 |
| tlpa disulfide reductase family protein | PLIM_RS22665 | Not Available | + | 1982775 - 1983476 | 26405.7 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | PLIM_RS07980 | P46322 | + | 1983594 - 1984175 | 21537.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.