Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS07880 | Not Available | + | 1957499 - 1958458 | 36801.8 |
| Trna-leu | Not Available | Not Available | + | 1958672 - 1958757 | Not Available |
| sulfatase-like hydrolase/transferase | PLIM_RS07890 | Q08890 | - | 1958804 - 1960417 | 60172.6 |
| sulfatase | PLIM_RS07895 | Not Available | - | 1960491 - 1962335 | 67274.0 |
| nad(+)/nadh kinase | PLIM_RS07900 | Q7UWB8 | - | 1962465 - 1963328 | 31853.7 |
| hypothetical protein | PLIM_RS07905 | Not Available | - | 1963400 - 1963771 | 13684.7 |
| site-2 protease family protein | PLIM_RS07910 | Not Available | + | 1963979 - 1965307 | 48351.6 |
| type 1 glutamine amidotransferase domain-containing protein | PLIM_RS07915 | Q5JGM7 | - | 1965336 - 1965878 | 19840.0 |
| duf1501 domain-containing protein | PLIM_RS07920 | Not Available | - | 1965918 - 1967381 | 53514.8 |
| psd1 and planctomycete cytochrome c domain-containing protein | PLIM_RS07925 | Not Available | - | 1967447 - 1970113 | 100829.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.