Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abgt family transporter | PLIM_RS07820 | P46133 | - | 1946962 - 1948533 | 55580.5 |
| slc13 family permease | PLIM_RS07825 | P0AFU3 | - | 1948644 - 1950506 | 66393.9 |
| multidrug efflux smr transporter | PLIM_RS07835 | Q8D1E4 | - | 1950691 - 1951008 | 11332.4 |
| aaa family atpase | PLIM_RS07845 | Not Available | + | 1951464 - 1951904 | 16881.2 |
| trna(his) guanylyltransferase thg1 family protein | PLIM_RS07850 | Q5UP24 | + | 1951894 - 1952670 | 30117.0 |
| aaa family atpase | PLIM_RS07855 | Not Available | + | 1952673 - 1953122 | 17228.5 |
| sir2 family nad-dependent protein deacetylase | PLIM_RS07860 | Q9I4L0 | + | 1953152 - 1953967 | 29582.2 |
| Trna-pro | Not Available | Not Available | + | 1954087 - 1954161 | Not Available |
| hypothetical protein | PLIM_RS07870 | Not Available | + | 1954454 - 1955122 | 23573.3 |
| 16s ribosomal rna | Not Available | Not Available | + | 1955583 - 1957118 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.