Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter atp-binding protein pstb | PLIM_RS07710 | O27764 | - | 1916451 - 1917332 | 32766.6 |
| phosphate abc transporter permease psta | PLIM_RS07715 | P46340 | - | 1917341 - 1918360 | 36851.0 |
| phosphate abc transporter permease subunit pstc | PLIM_RS07720 | P46339 | - | 1918402 - 1919433 | 37451.6 |
| psts family phosphate abc transporter substrate-binding protein | PLIM_RS07725 | P39665 | - | 1919653 - 1920669 | 36424.3 |
| atp-binding protein | PLIM_RS07730 | Not Available | - | 1920958 - 1922712 | 65572.4 |
| alpha-e domain-containing protein | PLIM_RS07735 | Not Available | - | 1923178 - 1924185 | 38507.6 |
| circularly permuted type 2 atp-grasp protein | PLIM_RS07740 | Q55587 | - | 1924290 - 1925795 | 56032.2 |
| transglutaminase family protein | PLIM_RS07745 | P9WL92 | - | 1925880 - 1926794 | 33956.7 |
| circularly permuted type 2 atp-grasp protein | PLIM_RS07750 | P9WL97 | - | 1926842 - 1929535 | 101441.0 |
| duf2126 domain-containing protein | PLIM_RS07755 | Not Available | - | 1929715 - 1933281 | 134242.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.