Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS07610 | Not Available | + | 1891298 - 1891543 | 8618.61 |
| hypothetical protein | PLIM_RS07615 | Not Available | + | 1891644 - 1892627 | 34995.5 |
| 8-amino-7-oxononanoate synthase | PLIM_RS07620 | Q1DCV8 | + | 1892630 - 1893838 | 44228.0 |
| hypothetical protein | PLIM_RS07625 | Not Available | + | 1894221 - 1894682 | 17134.4 |
| rna-binding protein | PLIM_RS07630 | Q9LIS2 | + | 1894698 - 1895012 | 10903.6 |
| trna (cytidine(34)-2'-o)-methyltransferase | PLIM_RS07635 | P32813 | + | 1895360 - 1895830 | 17557.4 |
| serine/threonine protein kinase | PLIM_RS07640 | P33973 | + | 1896212 - 1898347 | 79503.1 |
| aldehyde dehydrogenase (nadp(+)) | PLIM_RS07645 | Q08IC0 | - | 1898452 - 1900035 | 55865.4 |
| sulfite exporter taue/safe family protein | PLIM_RS07650 | P46490 | - | 1900241 - 1901017 | 27563.7 |
| gtp-binding protein | PLIM_RS07655 | P94400 | + | 1901293 - 1902519 | 45086.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.