Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS07560 | Not Available | + | 1880967 - 1881578 | 23833.4 |
| prenyltransferase/squalene oxidase repeat-containing protein | PLIM_RS22640 | Not Available | - | 1881630 - 1883846 | 80174.0 |
| biopolymer transporter exbd | PLIM_RS07570 | Q9ZHV9 | - | 1884015 - 1884431 | 15324.7 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | PLIM_RS22645 | Not Available | + | 1884841 - 1886145 | 49305.6 |
| tfox/sxy family dna transformation protein | PLIM_RS25000 | Not Available | - | 1886236 - 1886499 | 9893.16 |
| gnat family n-acetyltransferase | PLIM_RS25005 | Not Available | - | 1886558 - 1887058 | 18086.9 |
| tigr03067 domain-containing protein | PLIM_RS22650 | Not Available | - | 1887378 - 1887803 | 15566.8 |
| hypothetical protein | PLIM_RS07590 | Not Available | - | 1888406 - 1888900 | 18562.8 |
| duf1254 domain-containing protein | PLIM_RS07595 | Not Available | - | 1889069 - 1890484 | 52207.6 |
| Trna-pro | Not Available | Not Available | + | 1891201 - 1891278 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.